Search results for "2ND-ORDER PERTURBATION-THEORY"

showing 5 items of 5 documents

Assessment of the Potential Energy Hypersurfaces in Thymine within Multiconfigurational Theory: CASSCF vs. CASPT2

2016

The present study provides new insights into the topography of the potential energy hypersurfaces (PEHs) of the thymine nucleobase in order to rationalize its main ultrafast photochemical decay paths by employing two methodologies based on the complete active space self-consistent field (CASSCF) and the complete active space second-order perturbation theory (CASPT2) methods: (i) CASSCF optimized structures and energies corrected with the CASPT2 method at the CASSCF geometries and (ii) CASPT2 optimized geometries and energies. A direct comparison between these strategies is drawn, yielding qualitatively similar results within a static framework. A number of analyses are performed to assess t…

Chemistry Multidisciplinary2-DIMENSIONAL ELECTRONIC SPECTROSCOPYPharmaceutical Sciencephotostability0305 Organic Chemistry01 natural sciencesLOWEST TRIPLET-STATEAnalytical ChemistryInterpretation (model theory)Molecular dynamicschemistry.chemical_compoundComputational chemistryDrug DiscoveryComplete active spacePerturbation theoryRETINAL CHROMOPHORE MODELComputingMilieux_MISCELLANEOUSAB-INITIOphotochemistry010304 chemical physicsBasis (linear algebra)ChemistryCOUPLED-CLUSTER METHODSPhotochemical ProcessesPotential energy[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistryChemistryChemistry (miscellaneous)2ND-ORDER PERTURBATION-THEORYPhysical SciencesANO BASIS-SETSCASSCF/CASPT2Molecular MedicineThermodynamicsLife Sciences & BiomedicineBiochemistry & Molecular BiologyField (physics)INITIO MOLECULAR-DYNAMICSMolecular Dynamics Simulation010402 general chemistryMolecular physicsArticlelcsh:QD241-441lcsh:Organic chemistryCASSCF/CASPT2; photochemistry; DNA; thymine; photostability0103 physical sciencesthyminePhysical and Theoretical ChemistryULTRAFAST INTERNAL-CONVERSIONScience & TechnologyOrganic ChemistryDNAEXCITED-STATE DYNAMICS0104 chemical sciencesThymineModels ChemicalMolecules; Volume 21; Issue 12; Pages: 1666
researchProduct

A Combined Experimental and Theoretical Approach to the Photogeneration of 5,6-Dihydropyrimidin-5-yl Radicals in Nonaqueous Media

2016

The chemical fate of radical intermediates is relevant to understand the biological effects of radiation and to explain formation of DNA lesions. A direct approach to selectively generate the putative reactive intermediates is based on the irradiation of photolabile precursors. But, to date, radical formation and reactivity have only been studied in aqueous media, which do not completely mimic the micro environment provided by the DNA structure and its complexes with proteins. Thus, it is also important to evaluate the photogeneration of nucleoside-based radicals in nonaqueous media. The attention here is focused on the independent generation of 5,6-dihydropyrimidin-5-yl radicals in organic…

KetoneTHYMIDINEDNA damageRadicalReactive intermediate010402 general chemistryPhotochemistryHydrogen atom abstraction01 natural sciencesQUIMICA ORGANICAAQUEOUS-SOLUTIONSQUIMICA ANALITICASTRAND SCISSIONReactivity (chemistry)REPAIRchemistry.chemical_classificationAqueous solution010405 organic chemistryOrganic ChemistryINDEPENDENT GENERATION0104 chemical sciences56-DIHYDROTHYMID-5-YLDNA-DAMAGEchemistry2ND-ORDER PERTURBATION-THEORYRADIATIONFlash photolysisHYDROGEN-ATOM ABSTRACTIONThe Journal of Organic Chemistry
researchProduct

Excited-state non-radiative decay in stilbenoid compounds: An: Ab initio quantum-chemistry study on size and substituent effects

2019

In the framework of optoelectronic luminescent materials, non-radiative decay mechanisms are relevant to interpret efficiency losses. These radiationless processes are herein studied theoretically for a series of stilbenoid derivatives, including distyrylbenzene (DSB) and cyano-substituted distyrylbenzene (DCS) molecules in vacuo. Given the difficulties of excited-state reaction path determinations, a simplified computational strategy is defined based on the exploration of the potential energy surfaces (PES) along the elongation, twisting, and pyramidalization of the vinyl bonds. For such exploration, density functional theory (DFT), time-dependent (TD)DFT, and complete-active-space self-co…

Materials scienceAb initioGeneral Physics and Astronomy02 engineering and technology010402 general chemistry01 natural sciencesQuantum chemistryAGGREGATION-INDUCED EMISSIONYIELDSSTYRYLSTILBENEMoleculeFLUORESCENCEPhysical and Theoretical ChemistryPerturbation theoryBASIS-SETSISOMERIZATIONPHOTOCHEMISTRYConical intersectionCONICAL INTERSECTION021001 nanoscience & nanotechnologyPotential energy0104 chemical sciencesChemical physics2ND-ORDER PERTURBATION-THEORYExcited stateCIS-TRANS PHOTOISOMERIZATIONDensity functional theory0210 nano-technology
researchProduct

Modelling Photoionisation in Isocytosine: Potential Formation of Longer‐Lived Excited State Cations in its Keto Form

2021

Abstract Studying the effects of UV and VUV radiation on non‐canonical DNA/RNA nucleobases allows us to compare how they release excess energy following absorption with respect to their canonical counterparts. This has attracted much research attention in recent years because of its likely influence on the origin of our genetic lexicon in prebiotic times. Here we present a CASSCF and XMS‐CASPT2 theoretical study of the photoionisation of non‐canonical pyrimidine nucleobase isocytosine in both its keto and enol tautomeric forms. We analyse their lowest energy cationic excited states including 2π+ , 2nO+ and 2nN+ and compare these to the corresponding electronic states in cytosine. Investigat…

Models MolecularCASPT2Ultraviolet RaysADNPhysics Atomic Molecular & ChemicalRELAXATION DYNAMICSCASSCFArticleCytosineMOLECULAR WAVE-FUNCTIONSCationsIMPLEMENTATION0307 Theoretical and Computational ChemistryPhysical and Theoretical Chemistry0306 Physical Chemistry (incl. Structural)Radiació ionitzantScience & TechnologyChemical PhysicsMolecular StructureChemistry PhysicalConical IntersectionsPhysicsSPECTROSCOPIC FINGERPRINTSDNAArticlesKetonesPhotochemical ProcessesURACILAtomic and Molecular Physics and OpticsChemistryPhotostability2ND-ORDER PERTURBATION-THEORYPhotoionisationPhysical SciencesANO BASIS-SETSSIMULATION0202 Atomic Molecular Nuclear Particle and Plasma PhysicsCASSCF/CASPT2RNAELECTRON CORRELATIONDNA/RNAChemPhysChem
researchProduct

Computational determination of the dominant triplet population mechanism in photoexcited benzophenone

2014

In benzophenone, intersystem crossing occurs efficiently between the S-1(n pi(star)) state and the T-1 state of dominant n pi(star) character, leading to excited triplet states after photoexcitation. The transition mechanism between S-1(n pi(star)) and T-1 is still a matter of debate, despite several experimental studies. Quantum mechanical calculations have been performed in order to assess the relative efficiencies of previously proposed mechanisms, in particular, the direct S-1 -> T-1 and indirect S-1 -> T-2(pi pi(star)) -> T-1 ones. Multiconfigurational wave function based methods are used to discuss the nature of the relevant states and also to determine minimum energy paths a…

STATE DIPOLE-MOMENTSPopulationMechanistic organic photochemistryEXCITED BENZOPHENONEGeneral Physics and AstronomyGAS-PHASEABSORPTION-SPECTROSCOPYchemistry.chemical_compoundORGANIC-PHOTOCHEMISTRYMOLECULAR WAVE-FUNCTIONSBenzophenonePhysical and Theoretical ChemistryeducationWave functioneducation.field_of_studyROW ATOMSChemistryCONICAL INTERSECTIONSPhotoexcitation[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistryIntersystem crossingExcited state2ND-ORDER PERTURBATION-THEORYANO BASIS-SETSAtomic physicsPhosphorescence
researchProduct